Os06t0172000-01

[1] chr06: 3639787 - 3642223 (+)

[2] [Name] Os06t0172000-01

[3] [GO] Cellular Component: nucleus (GO:0005634),Molecular Function: transcription regulator activity (GO:0030528),Biological Process: regulation of transcription (GO:0045449)

[4] [InterPro] Basic helix-loop-helix dimerisation region bHLH (IPR001092),Pentatricopeptide repeat (IPR002885)

[5] [Locus_id] Os06g0172000

[6] [Note] Pentatricopeptide repeat domain containing protein.

[7] [ORF_evidence] InterPro

[8] [Transcript_evidence] AK068738 (DDBJ%2C Best hit)

[9] [NIAS_FLcDNA] J013158I18

[10] [Sequence_download] Os06t0172000-01

[11] [ID_converter] Os06g0172000

[12] [Blastp TAIR9_pep, 1st] (score: 570.0, e-value: 1.0e-163, pos%: 81) AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19763152-19765136 FORWARD

[13] [Blastp TAIR9_pep, 2nd] (score: 369.0, e-value: 1.0e-102, pos%: 65) AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G48730.1); Has 17188 Blast hits to 5538 proteins in 167 species: Archae - 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants - 16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | chr3:19704729-19706417 REVERSE

[14] [Blastp TAIR9_pep, 3rd] (score: 320.0, e-value: 1.0e-087, pos%: 59) AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) | chr3:1956658-1958240 REVERSE

[1] http://rapdb.dna.affrc.go.jp/